Transcript: ENSMUST00000233630.2 Vmn2r110-204

Description

vomeronasal 2, receptor 110 [Source:MGI Symbol;Acc:MGI:3644602]

Gene Synonyms

EG224582

Location

Chromosome 17: 20,788,022-20,816,685 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature, is associated with 1734 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000091259.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000169559.3	Vmn2r110-201	8810	858aa	ENSMUSP00000129347.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49988	E9PWD5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000233022.2	Vmn2r110-203	8747	837aa	ENSMUSP00000156560.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WCK1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232904.2	Vmn2r110-202	9104	78aa	ENSMUSP00000156608.2	Nonsense mediated decay		A0A3B2W3V0	-
ENSMUST00000233630.2	Vmn2r110-204	9041	78aa	ENSMUSP00000156414.2	Nonsense mediated decay		A0A3B2W3V0	-

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 9,041 bps, Translation length: 78 residues

Version

ENSMUST00000233630.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

Transcript: ENSMUST00000233630.2 Vmn2r110-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000233630.2 Vmn2r110-204

Summary

About Us

Get help

Our sister sites

Follow us