Transcript: ENSMUST00000231798.2 Senp2-205

Description

SUMO/sentrin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1923076]

Gene Synonyms

2310007L05Rik, 4930538C18Rik

Location

Chromosome 16: 21,828,403-21,866,631 forward strand.

About this transcript

This transcript has 16 exons, is associated with 2214 variant alleles and maps to 423 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022855.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023561.8	Senp2-201	4499	588aa	ENSMUSP00000023561.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28065	Q91ZX6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232534.2	Senp2-207	683	198aa	ENSMUSP00000155909.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P6A3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000232263.2	Senp2-206	3702	222aa	ENSMUSP00000156054.2	Nonsense mediated decay		A0A338P6M2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000231798.2	Senp2-205	2883	64aa	ENSMUSP00000156045.2	Nonsense mediated decay		A0A338P710	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000232679.2	Senp2-208	2239	105aa	ENSMUSP00000156326.2	Nonsense mediated decay		A0A338P790	-
ENSMUST00000231724.2	Senp2-204	2135	63aa	ENSMUSP00000156004.2	Nonsense mediated decay		A0A338P6J8	-
ENSMUST00000231632.3	Senp2-203	296	34aa	ENSMUSP00000156157.3	Nonsense mediated decay		A0A338P6Y3	-
ENSMUST00000231408.2	Senp2-202	1605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 16, Coding exons: 2, Transcript length: 2,883 bps, Translation length: 64 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000231798.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000231798.2 Senp2-205

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Transcript: ENSMUST00000231798.2 Senp2-205

Summary

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