Transcript: ENSMUST00000230011.2 Dmc1-204

Description

DNA meiotic recombinase 1 [Source:MGI Symbol;Acc:MGI:105393]

Gene Synonyms

Dmc1, Dmc1h, Mei11, sgdp

Location

Chromosome 15: 79,445,771-79,489,310 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 1 domain and feature, is associated with 2254 variant alleles and maps to 226 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022429.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023065.8	Dmc1-201	2219	340aa	ENSMUSP00000023065.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27644	Q14AN8 Q61880	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229408.2	Dmc1-202	1931	285aa	ENSMUSP00000155228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8C610	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000230011.2	Dmc1-204	1772	109aa	ENSMUSP00000154933.2	Nonsense mediated decay		A0A2R8VHC3	-
ENSMUST00000230121.2	Dmc1-205	457	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000229472.2	Dmc1-203	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 9, Coding exons: 5, Transcript length: 1,772 bps, Translation length: 109 residues

Version

ENSMUST00000230011.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000230011.2 Dmc1-204

Summary

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Transcript: ENSMUST00000230011.2 Dmc1-204

Summary

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