Transcript: ENSMUST00000227909.2 Vmn1r20-202

Description

vomeronasal 1 receptor 20 [Source:MGI Symbol;Acc:MGI:3644381]

Gene Synonyms

Gm5569

Location

Chromosome 6: 57,405,915-57,412,246 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 840 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000115253.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000227909.2	Vmn1r20-202	3709	303aa	ENSMUSP00000153815.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51795	K7N778	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000226808.2	Vmn1r20-201	912	303aa	ENSMUSP00000153909.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51795	K7N778	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 3,709 bps, Translation length: 303 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51795

Version

ENSMUST00000227909.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000227909.2 Vmn1r20-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000227909.2 Vmn1r20-202

Summary

About Us

Get help

Our sister sites

Follow us