Transcript: ENSMUST00000223913.2 Shisal2b-202

Description

shisa like 2B [Source:MGI Symbol;Acc:MGI:1925053]

Gene Synonyms

A930021C24Rik, Fam159b

Location

Chromosome 13: 104,982,334-104,999,820 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1602 variant alleles and maps to 71 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000042655.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000043061.5	Shisal2b-201	1310	158aa	ENSMUSP00000042302.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26754	Q9D1Y9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000223913.2	Shisal2b-202	507	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000225969.2	Shisal2b-203	443	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 507 bps,

Version

ENSMUST00000223913.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000223913.2 Shisal2b-202

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Transcript: ENSMUST00000223913.2 Shisal2b-202

Summary

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