Transcript: ENSMUST00000220302.2 Nova2-202

Description

NOVA alternative splicing regulator 2 [Source:MGI Symbol;Acc:MGI:104296]

Gene Synonyms

LOC384569

Location

Chromosome 7: 18,659,813-18,699,244 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 23 domains and features, is associated with 2598 variant alleles and maps to 283 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000030411.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032571.10	Nova2-201	8372	556aa	ENSMUSP00000032571.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1W2P872-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000220302.2	Nova2-202	8372	492aa	ENSMUSP00000151939.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20882	A0A1W2P872	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 8,372 bps, Translation length: 492 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0A1W2P872

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20882

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000220302.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000220302.2 Nova2-202

Summary

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Transcript: ENSMUST00000220302.2 Nova2-202

Summary

About Us

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