Transcript: ENSMUST00000218325.2 Or51q1c-202

Description

olfactory receptor family 51 subfamily Q member 1C [Source:MGI Symbol;Acc:MGI:3030472]

Gene Synonyms

GA_x6K02T2PBJ9-6737723-6738670, MOR5-1, Olfr638

Location

Chromosome 7: 103,647,953-103,653,564 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 28 domains and features, is associated with 1334 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000094063.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000209757.3	Or51q1c-201	966	321aa	ENSMUSP00000148160.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21601	Q8VH20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000218325.2	Or51q1c-202	1158	315aa	ENSMUSP00000151996.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7TRQ2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,158 bps, Translation length: 315 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000218325.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

upstream ATG

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000218325.2 Or51q1c-202

Summary

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Transcript: ENSMUST00000218325.2 Or51q1c-202

Summary

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