Transcript: ENSMUST00000218277.2 9530020I12Rik-201

Description

RIKEN cDNA 9530020I12 gene [Source:MGI Symbol;Acc:MGI:1924692]

Location

Chromosome 12: 11,235,994-11,254,503 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1431 variant alleles and maps to 19 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000112041.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000218368.2	9530020I12Rik-202	1235	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000218277.2	9530020I12Rik-201	884	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000219371.2	9530020I12Rik-203	819	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 884 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000218277.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000218277.2 9530020I12Rik-201

Summary

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Transcript: ENSMUST00000218277.2 9530020I12Rik-201

Summary

About Us

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