Transcript: ENSMUST00000208418.2 Fam81b-201

Description

family with sequence similarity 81, member B [Source:MGI Symbol;Acc:MGI:2685122]

Gene Synonyms

LOC238726

Location

Chromosome 13: 76,349,827-76,453,191 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 7 domains and features, is associated with 5995 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000109228.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000208418.2	Fam81b-201	2760	432aa	ENSMUSP00000146649.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LI28	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000208586.2	Fam81b-202	513	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,760 bps, Translation length: 432 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000208418.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000208418.2 Fam81b-201

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Transcript: ENSMUST00000208418.2 Fam81b-201

Summary

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