Transcript: ENSMUST00000207825.2 Lipt2-202

Description

lipoyl(octanoyl) transferase 2 (putative) [Source:MGI Symbol;Acc:MGI:1914414]

Gene Synonyms

2610209A20Rik

Location

Chromosome 7: 99,808,566-99,809,861 forward strand.

About this transcript

This transcript has 2 exons, is associated with 582 variant alleles and maps to 113 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000030725.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000032967.4	Lipt2-201	1663	231aa	ENSMUSP00000032967.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS21494	Q9D009	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000207825.2	Lipt2-202	641	68aa	ENSMUSP00000147056.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A140LJ31	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 641 bps, Translation length: 68 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000207825.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSMUST00000207825.2 Lipt2-202

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Transcript: ENSMUST00000207825.2 Lipt2-202

Summary

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