Transcript: ENSMUST00000207228.3 Or4k49-201

Description

olfactory receptor family 4 subfamily K member 49 [Source:MGI Symbol;Acc:MGI:3031133]

Gene Synonyms

GA_x6K02T2Q125-72715642-72716580, MOR248-8, Olfr1299

Location

Chromosome 2: 111,491,764-111,496,159 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 25 domains and features, is associated with 589 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000109219.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000213511.2	Or4k49-202	1783	312aa	ENSMUSP00000149299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38197	Q7TQX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000207228.3	Or4k49-201	1678	312aa	ENSMUSP00000146528.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38197	Q7TQX5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,678 bps, Translation length: 312 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38197

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000207228.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000207228.3 Or4k49-201

Summary

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Transcript: ENSMUST00000207228.3 Or4k49-201

Summary

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