Transcript: ENSMUST00000186855.7 Zfp939-202

Description

zinc finger protein 939 [Source:MGI Symbol;Acc:MGI:3036240]

Gene Synonyms

9430025M13Rik

Location

Chromosome 7: 39,098,942-39,126,838 forward strand.

About this transcript

This transcript has 6 exons, is associated with 2390 variant alleles and maps to 141 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121502.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000243338.1	Zfp939-204	2317	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000247017.2	Zfp939-207	2625	No protein	-	lncRNA	-
ENSMUST00000247491.2	Zfp939-208	2599	No protein	-	lncRNA	-
ENSMUST00000244123.1	Zfp939-205	2500	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331248.1	Zfp939-219	2496	No protein	-	lncRNA	-
ENSMUST00000186855.7	Zfp939-202	2481	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245274.2	Zfp939-206	2162	No protein	-	lncRNA	-
ENSMUST00000247552.1	Zfp939-209	2161	No protein	-	lncRNA	-
ENSMUST00000243178.1	Zfp939-203	1220	No protein	-	lncRNA	-
ENSMUST00000331241.1	Zfp939-212	1089	No protein	-	lncRNA	-
ENSMUST00000331244.1	Zfp939-215	942	No protein	-	lncRNA	-
ENSMUST00000331240.1	Zfp939-211	758	No protein	-	lncRNA	-
ENSMUST00000331242.1	Zfp939-213	706	No protein	-	lncRNA	-
ENSMUST00000331245.1	Zfp939-216	612	No protein	-	lncRNA	-
ENSMUST00000331247.1	Zfp939-218	568	No protein	-	lncRNA	-
ENSMUST00000331239.1	Zfp939-210	566	No protein	-	lncRNA	-
ENSMUST00000331246.1	Zfp939-217	556	No protein	-	lncRNA	-
ENSMUST00000331249.1	Zfp939-220	547	No protein	-	lncRNA	-
ENSMUST00000331243.1	Zfp939-214	385	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,481 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000186855.7

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENSMUST00000186855.7 Zfp939-202

Summary

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Transcript: ENSMUST00000186855.7 Zfp939-202

Summary

About Us

Get help

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