Transcript: ENSMUST00000181949.5 4930558J18Rik-201

Description

RIKEN cDNA 4930558J18 gene [Source:MGI Symbol;Acc:MGI:1922573]

Location

Chromosome 1: 57,398,089-57,416,782 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 1423 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097519.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000300940.1	4930558J18Rik-206	1088	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244129.1	4930558J18Rik-205	2521	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000181949.5	4930558J18Rik-201	2423	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000300946.1	4930558J18Rik-212	1110	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000300950.1	4930558J18Rik-216	1059	No protein	-	lncRNA	-
ENSMUST00000243921.2	4930558J18Rik-204	1054	No protein	-	lncRNA	-
ENSMUST00000241586.2	4930558J18Rik-203	1047	No protein	-	lncRNA	-
ENSMUST00000300949.1	4930558J18Rik-215	1040	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240813.2	4930558J18Rik-202	1037	No protein	-	lncRNA	-
ENSMUST00000300944.1	4930558J18Rik-210	941	No protein	-	lncRNA	-
ENSMUST00000300945.1	4930558J18Rik-211	928	No protein	-	lncRNA	-
ENSMUST00000300943.1	4930558J18Rik-209	905	No protein	-	lncRNA	-
ENSMUST00000300941.1	4930558J18Rik-207	860	No protein	-	lncRNA	-
ENSMUST00000300948.1	4930558J18Rik-214	857	No protein	-	lncRNA	-
ENSMUST00000300942.1	4930558J18Rik-208	833	No protein	-	lncRNA	-
ENSMUST00000300952.1	4930558J18Rik-218	806	No protein	-	lncRNA	-
ENSMUST00000300947.1	4930558J18Rik-213	702	No protein	-	lncRNA	-
ENSMUST00000300951.1	4930558J18Rik-217	564	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,423 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000181949.5

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000181949.5 4930558J18Rik-201

Summary

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Transcript: ENSMUST00000181949.5 4930558J18Rik-201

Summary

About Us

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