Mouse (GRCm39)
Description

SMG1 nonsense mediated mRNA decay associated PI3K related kinase [Source:MGI Symbol;Acc:MGI:1919742]

Gene Synonyms

2610207I05Rik, 5430435M13Rik, C130002K18Rik, SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)

About this transcript

This transcript has 2 exons, is associated with 416 variant alleles and maps to 31 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000032891.15Smg1-201155573658aaENSMUSP00000032891.9
 
Protein coding
CCDS40102Q8BKX6 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000179047.3Smg1-2031516335aaENSMUSP00000137172.2
 
Protein coding
J3QPA7 TSL:5CDS 3' incomplete
ENSMUST00000178025.2Smg1-20278596aaENSMUSP00000136406.2
 
Protein coding
J3QMR1 TSL:3CDS 5' incomplete
ENSMUST00000179331.9Smg1-2041214759aaENSMUSP00000137592.3
 
Nonsense mediated decay
J3QQ22 TSL:5CDS 5' incomplete
ENSMUST00000207162.2Smg1-207447No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000179847.2Smg1-2053911No protein-
 
Retained intron
-TSL:1
ENSMUST00000180009.8Smg1-2063630No protein-
 
Retained intron
-TSL:1
ENSMUST00000208209.2Smg1-2092287No protein-
 
Retained intron
-TSL:5
ENSMUST00000208930.2Smg1-2101534No protein-
 
Retained intron
-TSL:NA
ENSMUST00000208025.2Smg1-2081460No protein-
 
Retained intron
-TSL:NA
Statistics

Exons: 2, Coding exons: 2, Transcript length: 785 bps, Translation length: 96 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000178025.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.