Mouse (GRCm39)
Description

synuclein, alpha interacting protein (synphilin) [Source:MGI Symbol;Acc:MGI:1915097]

Gene Synonyms

4933427B05Rik, SYPH1, synphilin-1

Location
About this transcript

This transcript has 11 exons, is annotated with 35 domains and features, is associated with 7163 variant alleles and maps to 233 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000178678.8Sncaip-2063724965aaENSMUSP00000137367.2
 
Protein coding
CCDS57124G5E848 Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENSMUST00000025413.14Sncaip-2013632965aaENSMUSP00000025413.7
 
Protein coding
CCDS57124G5E848 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000115410.9Sncaip-2023585914aaENSMUSP00000111069.3
 
Protein coding
Q3V1N2 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000178011.8Sncaip-2053433915aaENSMUSP00000137549.2
 
Protein coding
CCDS37820E9Q4E2 GENCODE basicAPPRIS ALT1TSL:1
ENSMUST00000163742.9Sncaip-2033272915aaENSMUSP00000127189.3
 
Protein coding
CCDS37820E9Q4E2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000179625.8Sncaip-2092568855aaENSMUSP00000136838.2
 
Protein coding
J3QNK1 GENCODE basicTSL:5
ENSMUST00000179689.2Sncaip-2101512503aaENSMUSP00000137107.2
 
Protein coding
J3QP58 GENCODE basicTSL:5
ENSMUST00000179038.2Sncaip-20840410aaENSMUSP00000137201.2
 
Protein coding
A0A0G2JDC8 TSL:5CDS 3' incomplete
ENSMUST00000178883.8Sncaip-207238355aaENSMUSP00000136200.2
 
Nonsense mediated decay
J3QPG2 TSL:5
ENSMUST00000180259.8Sncaip-211231255aaENSMUSP00000137282.2
 
Nonsense mediated decay
J3QPG2 TSL:5
ENSMUST00000177861.8Sncaip-204190562aaENSMUSP00000136021.2
 
Nonsense mediated decay
J3KMU0 TSL:5
Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,433 bps, Translation length: 915 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37820

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000178011.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.