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Mouse (GRCm39)
Description

cleavage and polyadenylation specific factor 6 [Source:MGI Symbol;Acc:MGI:1913948]

Gene Synonyms

4733401N12Rik, CFIM68, HPBRII-4, HPBRII-7

About this transcript

This transcript has 11 exons, is annotated with 27 domains and features, is associated with 1729 variant alleles and maps to 206 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000176670.8Cpsf6-2062227588aaENSMUSP00000135150.2
 
Protein coding
H3BJW3 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT1TSL:5
ENSMUST00000069168.13Cpsf6-2016526551aaENSMUSP00000068408.7
 
Protein coding
CCDS24193Q6NVF9 GENCODE BasicAPPRIS P4TSL:1
ENSMUST00000177145.8Cpsf6-2083819551aaENSMUSP00000135136.2
 
Protein coding
CCDS24193Q6NVF9 GENCODE BasicAPPRIS P4TSL:1
ENSMUST00000176686.8Cpsf6-2072200552aaENSMUSP00000134823.2
 
Protein coding
CCDS78898H3BJ30 GENCODE BasicAPPRIS ALT1TSL:1
ENSMUST00000175888.2Cpsf6-20244939aaENSMUSP00000135840.2
 
Protein coding
H3BLM1 TSL:3CDS 5' incomplete
ENSMUST00000175924.2Cpsf6-20337791aaENSMUSP00000135848.2
 
Protein coding
H3BLM9 TSL:5CDS 3' incomplete
ENSMUST00000176480.8Cpsf6-204717182aaENSMUSP00000135550.2
 
Nonsense mediated decay
H3BKW0 TSL:3CDS 5' incomplete
ENSMUST00000176567.2Cpsf6-2052749No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,227 bps, Translation length: 588 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000176670.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.