Transcript: ENSMUST00000174063.2 H2-T24-202

Description

histocompatibility 2, T region locus 24 [Source:MGI Symbol;Acc:MGI:95958]

Gene Synonyms

H-2T24

Location

Chromosome 17: 36,317,161-36,331,417 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 765 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000053835.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000113760.10	H2-T24-201	2182	363aa	ENSMUSP00000109389.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37607	F8VQG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000174063.2	H2-T24-202	884	128aa	ENSMUSP00000133476.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3UWY8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 884 bps, Translation length: 128 residues

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000174063.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000174063.2 H2-T24-202

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Transcript: ENSMUST00000174063.2 H2-T24-202

Summary

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