Transcript: ENSMUST00000173956.3 Vmn1r62-201

Description

vomeronasal 1 receptor 62 [Source:MGI Symbol;Acc:MGI:3033471]

Gene Synonyms

V1rd2, V1rd8, V3R2

Location

Chromosome 7: 5,676,630-5,679,662 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 35 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000092579.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000173956.3	Vmn1r62-201	2102	300aa	ENSMUSP00000134168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57477	Q8R2C0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000237772.2	Vmn1r62-202	1572	300aa	ENSMUSP00000157413.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57477	Q8R2C0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,102 bps, Translation length: 300 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57477

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000173956.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000173956.3 Vmn1r62-201

Summary

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Transcript: ENSMUST00000173956.3 Vmn1r62-201

Summary

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