Transcript: ENSMUST00000167704.3 1700112D23Rik-201

Description

RIKEN cDNA 1700112D23 gene [Source:MGI Symbol;Acc:MGI:1920861]

Location

Chromosome 3: 28,756,372-28,835,274 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 5618 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000091329.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000293005.1	1700112D23Rik-213	665	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000293006.1	1700112D23Rik-214	1155	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293013.1	1700112D23Rik-221	1138	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293015.1	1700112D23Rik-223	1124	No protein	-	lncRNA	-
ENSMUST00000293012.1	1700112D23Rik-220	1091	No protein	-	lncRNA	-
ENSMUST00000293010.1	1700112D23Rik-218	1087	No protein	-	lncRNA	-
ENSMUST00000293011.1	1700112D23Rik-219	1057	No protein	-	lncRNA	-
ENSMUST00000244869.2	1700112D23Rik-212	1033	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293007.1	1700112D23Rik-215	1022	No protein	-	lncRNA	-
ENSMUST00000293009.1	1700112D23Rik-217	1017	No protein	-	lncRNA	-
ENSMUST00000167704.3	1700112D23Rik-201	1007	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000293029.1	1700112D23Rik-235	974	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293024.1	1700112D23Rik-230	972	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293014.1	1700112D23Rik-222	968	No protein	-	lncRNA	-
ENSMUST00000242316.2	1700112D23Rik-208	966	No protein	-	lncRNA	-
ENSMUST00000293031.1	1700112D23Rik-236	938	No protein	-	lncRNA	-
ENSMUST00000293035.1	1700112D23Rik-240	909	No protein	-	lncRNA	-
ENSMUST00000243023.2	1700112D23Rik-209	900	No protein	-	lncRNA	-
ENSMUST00000293017.1	1700112D23Rik-225	880	No protein	-	lncRNA	-
ENSMUST00000241989.2	1700112D23Rik-206	877	No protein	-	lncRNA	-
ENSMUST00000293032.1	1700112D23Rik-237	869	No protein	-	lncRNA	-
ENSMUST00000244720.1	1700112D23Rik-211	794	No protein	-	lncRNA	-
ENSMUST00000293020.1	1700112D23Rik-226	739	No protein	-	lncRNA	-
ENSMUST00000293016.1	1700112D23Rik-224	721	No protein	-	lncRNA	-
ENSMUST00000293023.1	1700112D23Rik-229	693	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240972.2	1700112D23Rik-203	682	No protein	-	lncRNA	-
ENSMUST00000293028.1	1700112D23Rik-234	654	No protein	-	lncRNA	-
ENSMUST00000243471.2	1700112D23Rik-210	575	No protein	-	lncRNA	-
ENSMUST00000293021.1	1700112D23Rik-227	565	No protein	-	lncRNA	-
ENSMUST00000293027.1	1700112D23Rik-233	562	No protein	-	lncRNA	-
ENSMUST00000293008.1	1700112D23Rik-216	534	No protein	-	lncRNA	-
ENSMUST00000241072.1	1700112D23Rik-205	531	No protein	-	lncRNA	-
ENSMUST00000241016.2	1700112D23Rik-204	527	No protein	-	lncRNA	-
ENSMUST00000293026.1	1700112D23Rik-232	519	No protein	-	lncRNA	-
ENSMUST00000293033.1	1700112D23Rik-238	469	No protein	-	lncRNA	-
ENSMUST00000242238.2	1700112D23Rik-207	417	No protein	-	lncRNA	-
ENSMUST00000293025.1	1700112D23Rik-231	415	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000293034.1	1700112D23Rik-239	410	No protein	-	lncRNA	-
ENSMUST00000293022.1	1700112D23Rik-228	407	No protein	-	lncRNA	-
ENSMUST00000293036.1	1700112D23Rik-241	373	No protein	-	lncRNA	-
ENSMUST00000193387.2	1700112D23Rik-202	299	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,007 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000167704.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000167704.3 1700112D23Rik-201

Summary

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Transcript: ENSMUST00000167704.3 1700112D23Rik-201

Summary

About Us

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