Transcript: ENSMUST00000142533.3 Gm12279-201

Description

predicted gene 12279 [Source:MGI Symbol;Acc:MGI:3649630]

Location

About this transcript

This transcript has 3 exons, is associated with 755 variant alleles and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000142533.3	Gm12279-201	1799	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245911.1	Gm12279-204	1316	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000241978.1	Gm12279-202	1195	No protein	-	lncRNA	-
ENSMUST00000245332.1	Gm12279-203	548	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,799 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000142533.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.