Transcript: ENSMUST00000131502.2 Hoxaas3-201

Description

Hoxa cluster antisense RNA 3 [Source:MGI Symbol;Acc:MGI:1919878]

Gene Synonyms

2700086A05Rik

Location

Chromosome 6: 52,178,104-52,190,595 forward strand.

About this transcript

This transcript has 3 exons, is associated with 817 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000085696.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000136806.8	Hoxaas3-202	2207	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000131502.2	Hoxaas3-201	853	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000139055.2	Hoxaas3-203	575	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 853 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000131502.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000131502.2 Hoxaas3-201

Summary

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Transcript: ENSMUST00000131502.2 Hoxaas3-201

Summary

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