Transcript: ENSMUST00000125569.8 4930453H23Rik-202

Description

RIKEN cDNA 4930453H23 gene [Source:MGI Symbol;Acc:MGI:1921933]

Location

Chromosome X: 21,072,819-21,087,904 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1367 variant alleles and maps to 83 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000087358.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000125569.8	4930453H23Rik-202	1719	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000178516.3	4930453H23Rik-204	1717	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000096511.6	4930453H23Rik-201	1381	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000155208.3	4930453H23Rik-203	1201	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,719 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000125569.8

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000125569.8 4930453H23Rik-202

Summary

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Transcript: ENSMUST00000125569.8 4930453H23Rik-202

Summary

About Us

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