Transcript: ENSMUST00000123699.4 Gm13483-201

Description

predicted gene 13483 [Source:MGI Symbol;Acc:MGI:3651423]

Location

Chromosome 2: 50,186,536-50,324,004 forward strand.

About this transcript

This transcript has 3 exons, is associated with 9100 variant alleles and maps to 56 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000085862.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000281826.1	Gm13483-205	2236	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282284.1	Gm13483-234	1898	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282286.1	Gm13483-236	1832	No protein	-	lncRNA	-
ENSMUST00000282287.1	Gm13483-237	1675	No protein	-	lncRNA	-
ENSMUST00000282285.1	Gm13483-235	1642	No protein	-	lncRNA	-
ENSMUST00000282294.1	Gm13483-244	1544	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282274.1	Gm13483-224	1367	No protein	-	lncRNA	-
ENSMUST00000282273.1	Gm13483-223	1341	No protein	-	lncRNA	-
ENSMUST00000282288.1	Gm13483-238	1327	No protein	-	lncRNA	-
ENSMUST00000282258.1	Gm13483-208	1294	No protein	-	lncRNA	-
ENSMUST00000282260.1	Gm13483-210	1273	No protein	-	lncRNA	-
ENSMUST00000282272.1	Gm13483-222	1262	No protein	-	lncRNA	-
ENSMUST00000282269.1	Gm13483-219	1244	No protein	-	lncRNA	-
ENSMUST00000282263.1	Gm13483-213	1242	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282289.1	Gm13483-239	1239	No protein	-	lncRNA	-
ENSMUST00000282266.1	Gm13483-216	1236	No protein	-	lncRNA	-
ENSMUST00000282290.1	Gm13483-240	1230	No protein	-	lncRNA	-
ENSMUST00000138528.3	Gm13483-202	1160	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000282291.1	Gm13483-241	1090	No protein	-	lncRNA	-
ENSMUST00000282259.1	Gm13483-209	1087	No protein	-	lncRNA	-
ENSMUST00000282270.1	Gm13483-220	1085	No protein	-	lncRNA	-
ENSMUST00000282275.1	Gm13483-225	1085	No protein	-	lncRNA	-
ENSMUST00000282281.1	Gm13483-231	1065	No protein	-	lncRNA	-
ENSMUST00000282257.1	Gm13483-207	1045	No protein	-	lncRNA	-
ENSMUST00000282279.1	Gm13483-229	1041	No protein	-	lncRNA	-
ENSMUST00000123699.4	Gm13483-201	1030	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000282261.1	Gm13483-211	1018	No protein	-	lncRNA	-
ENSMUST00000282265.1	Gm13483-215	1018	No protein	-	lncRNA	-
ENSMUST00000282276.1	Gm13483-226	950	No protein	-	lncRNA	-
ENSMUST00000282271.1	Gm13483-221	949	No protein	-	lncRNA	-
ENSMUST00000282280.1	Gm13483-230	936	No protein	-	lncRNA	-
ENSMUST00000282267.1	Gm13483-217	883	No protein	-	lncRNA	-
ENSMUST00000282264.1	Gm13483-214	865	No protein	-	lncRNA	-
ENSMUST00000282277.1	Gm13483-227	863	No protein	-	lncRNA	-
ENSMUST00000282297.1	Gm13483-247	859	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282268.1	Gm13483-218	854	No protein	-	lncRNA	-
ENSMUST00000282262.1	Gm13483-212	849	No protein	-	lncRNA	-
ENSMUST00000282298.1	Gm13483-248	798	No protein	-	lncRNA	-
ENSMUST00000282296.1	Gm13483-246	761	No protein	-	lncRNA	-
ENSMUST00000282282.1	Gm13483-232	674	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000227437.3	Gm13483-203	668	No protein	-	lncRNA	-
ENSMUST00000282295.1	Gm13483-245	663	No protein	-	lncRNA	-
ENSMUST00000282283.1	Gm13483-233	655	No protein	-	lncRNA	-
ENSMUST00000282292.1	Gm13483-242	639	No protein	-	lncRNA	-
ENSMUST00000282293.1	Gm13483-243	611	No protein	-	lncRNA	-
ENSMUST00000282278.1	Gm13483-228	581	No protein	-	lncRNA	-
ENSMUST00000282301.1	Gm13483-251	554	No protein	-	lncRNA	-
ENSMUST00000281827.1	Gm13483-206	541	No protein	-	lncRNA	-
ENSMUST00000228816.2	Gm13483-204	410	No protein	-	lncRNA	-
ENSMUST00000282299.1	Gm13483-249	380	No protein	-	lncRNA	-
ENSMUST00000282300.1	Gm13483-250	313	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,030 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000123699.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000123699.4 Gm13483-201

Summary

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Transcript: ENSMUST00000123699.4 Gm13483-201

Summary

About Us

Get help

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