Transcript: ENSMUST00000117766.8 Mrpl1-201

Description

mitochondrial ribosomal protein L1 [Source:MGI Symbol;Acc:MGI:2137202]

Gene Synonyms

2410002L03Rik, 5830418D04Rik

Location

Chromosome 5: 96,357,352-96,414,586 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 3040 variant alleles and maps to 276 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000029486.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000117766.8	Mrpl1-201	3556	336aa	ENSMUSP00000112977.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19449	Q99N96	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000121477.2	Mrpl1-202	1550	276aa	ENSMUSP00000112451.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51567	Q9D3F3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,556 bps, Translation length: 336 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99N96

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19449

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000117766.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000117766.8 Mrpl1-201

Summary

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Transcript: ENSMUST00000117766.8 Mrpl1-201

Summary

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