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Mouse (GRCm39)
Description

intermediate filament family orphan 1 [Source:MGI Symbol;Acc:MGI:2444516]

Gene Synonyms

4733401N06Rik, A930037G23Rik, Iffo

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 1674 variant alleles and maps to 403 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000117675.8Iffo1-2012833562aaENSMUSP00000113088.3
 
Protein coding
CCDS39634Q8BXL9-1 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS ALT1TSL:1
ENSMUST00000119527.8Iffo1-2022840559aaENSMUSP00000113376.3
 
Protein coding
CCDS39635Q8BXL9-5 GENCODE BasicAPPRIS P4TSL:1
ENSMUST00000148835.3Iffo1-2072283381aaENSMUSP00000115080.2
 
Protein coding
F6VMG1 TSL:1CDS 5' incomplete
ENSMUST00000144364.8Iffo1-2063013372aaENSMUSP00000116701.3
 
Nonsense mediated decay
D6RH90 TSL:1
ENSMUST00000150417.8Iffo1-208436No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000139071.8Iffo1-2044233No protein-
 
Retained intron
-TSL:2
ENSMUST00000141230.8Iffo1-2053056No protein-
 
Retained intron
-TSL:2
ENSMUST00000135559.8Iffo1-2032868No protein-
 
Retained intron
-TSL:5
ENSMUST00000150474.2Iffo1-209811No protein-
 
Retained intron
-TSL:2
ENSMUST00000153006.2Iffo1-210476No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,833 bps, Translation length: 562 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BXL9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39634

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000117675.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.