Transcript: ENSMUST00000113480.2 Cysltr1-202

Description

cysteinyl leukotriene receptor 1 [Source:MGI Symbol;Acc:MGI:1926218]

Gene Synonyms

CysLT1R, cysteinyl leukotriene 1 receptor, leukotriene D4 receptor

Location

Chromosome X: 105,617,952-105,647,285 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 32 domains and features, is associated with 2101 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000052821.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000113480.2	Cysltr1-202	5142	352aa	ENSMUSP00000109108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41098	Q99JA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000064892.4	Cysltr1-201	1059	352aa	ENSMUSP00000063520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41098	Q99JA4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 5,142 bps, Translation length: 352 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99JA4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS41098

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000113480.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000113480.2 Cysltr1-202

Summary

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Transcript: ENSMUST00000113480.2 Cysltr1-202

Summary

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