Transcript: ENSMUST00000110320.9 Zc3h6-202

Description

zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]

Gene Synonyms

4631426G04Rik, 4833425H18Rik

Location

Chromosome 2: 128,809,322-128,860,483 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 54 domains and features, is associated with 2591 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000042851.18 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000110320.9	Zc3h6-202	4916	1177aa	ENSMUSP00000105949.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50707	A2AP88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000110319.3	Zc3h6-201	1484	151aa	ENSMUSP00000105948.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8BYK8-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 4,916 bps, Translation length: 1,177 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50707

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000110320.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000110320.9 Zc3h6-202

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Transcript: ENSMUST00000110320.9 Zc3h6-202

Summary

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