Mouse (GRCm39)
Description

chromodomain helicase DNA binding protein 3 [Source:MGI Symbol;Acc:MGI:1344395]

Gene Synonyms

2600010P09Rik, Chd7, Mi-2 alpha, Prp7, Prp9-1

Location
About this transcript

This transcript has 40 exons, is annotated with 96 domains and features, is associated with 1672 variant alleles and maps to 350 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000108661.8Chd3-20272612055aaENSMUSP00000104301.2
 
Protein coding
CCDS48825B1AR17 Ensembl CanonicalGENCODE basicAPPRIS P3TSL:5
ENSMUST00000092971.13Chd3-20160662021aaENSMUSP00000090649.7
 
Protein coding
E9Q614 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000128981.8Chd3-20456571886aaENSMUSP00000122137.2
 
Protein coding
F7C528 TSL:5CDS 5' and 3' incomplete
ENSMUST00000238797.2Chd3-2111264385aaENSMUSP00000159107.2
 
Protein coding
A0A5F8MQ82 CDS 5' incomplete
ENSMUST00000151436.2Chd3-209591197aaENSMUSP00000118172.2
 
Protein coding
F6V4V3 TSL:5CDS 5' and 3' incomplete
ENSMUST00000154046.8Chd3-210453151aaENSMUSP00000121192.2
 
Protein coding
B0QZH7 TSL:2CDS 5' and 3' incomplete
ENSMUST00000144701.2Chd3-207430143aaENSMUSP00000114520.2
 
Protein coding
B0QZH8 TSL:3CDS 5' and 3' incomplete
ENSMUST00000122992.2Chd3-2032153No protein-
 
Retained intron
-TSL:2
ENSMUST00000135909.8Chd3-2051882No protein-
 
Retained intron
-TSL:1
ENSMUST00000146930.2Chd3-208747No protein-
 
Retained intron
-TSL:3
ENSMUST00000144332.2Chd3-206432No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 40, Coding exons: 40, Transcript length: 7,261 bps, Translation length: 2,055 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48825

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000108661.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.