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Mouse (GRCm39)
Description

C9orf72, member of C9orf72-SMCR8 complex [Source:MGI Symbol;Acc:MGI:1920455]

Gene Synonyms

3110043O21Rik, Dennd9

Location
About this transcript

This transcript has 11 exons, is annotated with 4 domains and features, is associated with 2552 variant alleles and maps to 220 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000108127.4C9orf72-2033193481aaENSMUSP00000103762.4
 
Protein coding
CCDS38708Q6DFW0-1 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000084724.10C9orf72-2013413420aaENSMUSP00000081775.4
 
Protein coding
Q6DFW0-2 GENCODE BasicTSL:1
ENSMUST00000108126.8C9orf72-2022644317aaENSMUSP00000103761.2
 
Protein coding
A2ANZ2 GENCODE BasicTSL:1
ENSMUST00000149138.2C9orf72-206727No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000130538.8C9orf72-204703No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000156472.2C9orf72-2071370No protein-
 
Retained intron
-TSL:5
ENSMUST00000142628.2C9orf72-205528No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,193 bps, Translation length: 481 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DFW0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38708

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000108127.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.