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Mouse (GRCm39)
Description

PDZ domain containing 1 [Source:MGI Symbol;Acc:MGI:1928901]

Gene Synonyms

1700023D20Rik, 2610507N21Rik, 4921513F16Rik, D3Ertd537e, Nherf3, mPDZK1

Location
About this transcript

This transcript has 9 exons, is annotated with 31 domains and features, is associated with 2355 variant alleles and maps to 229 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000107070.8Pdzk1-2032711519aaENSMUSP00000102685.2
 
Protein coding
CCDS17649A0A0R4J1V0 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000058865.14Pdzk1-2012406519aaENSMUSP00000058936.8
 
Protein coding
CCDS17649A0A0R4J1V0 GENCODE BasicAPPRIS P1TSL:1
ENSMUST00000107069.8Pdzk1-2022219519aaENSMUSP00000102684.2
 
Protein coding
CCDS17649A0A0R4J1V0 GENCODE BasicAPPRIS P1TSL:1
ENSMUST00000138014.8Pdzk1-206622153aaENSMUSP00000115584.2
 
Protein coding
D3YZS9 TSL:3CDS 3' incomplete
ENSMUST00000128789.2Pdzk1-20453150aaENSMUSP00000123166.2
 
Protein coding
D3Z114 TSL:2CDS 3' incomplete
ENSMUST00000135031.8Pdzk1-205495125aaENSMUSP00000114157.2
 
Protein coding
D3YW13 TSL:2CDS 3' incomplete
ENSMUST00000153256.3Pdzk1-2072409519aaENSMUSP00000118846.2
 
Nonsense mediated decay
CCDS17649A0A0R4J1V0 TSL:1
Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,219 bps, Translation length: 519 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17649

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000107069.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

alternative 5' UTR [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.