Transcript: ENSMUST00000106862.3 Or51k1-201

Description

olfactory receptor family 51 subfamily K member 1 [Source:MGI Symbol;Acc:MGI:3030473]

Gene Synonyms

GA_x6K02T2PBJ9-6747143-6746193, MOR12-1, Olfr639

Location

Chromosome 7: 103,660,938-103,661,957 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 25 domains and features, is associated with 543 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000066263.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000215653.2	Or51k1-202	6570	316aa	ENSMUSP00000149743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40063	Q8VGY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000106862.3	Or51k1-201	1020	316aa	ENSMUSP00000102475.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40063	Q8VGY8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,020 bps, Translation length: 316 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40063

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000106862.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000106862.3 Or51k1-201

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Transcript: ENSMUST00000106862.3 Or51k1-201

Summary

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