Mouse (GRCm39)
Description

cadherin 23 (otocadherin) [Source:MGI Symbol;Acc:MGI:1890219]

Gene Synonyms

4930542A03Rik, USH1D, ahl, bob, mdfw, nmf112, nmf181, nmf252, sals

Location
About this transcript

This transcript has 71 exons, is annotated with 226 domains and features, is associated with 20753 variant alleles and maps to 610 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000105461.10Cdh23-202110963354aaENSMUSP00000101101.4
 
Protein coding
Q99PF4 Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000105464.9Cdh23-205110903352aaENSMUSP00000101104.3
 
Protein coding
CCDS56704K4DI74 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000105463.9Cdh23-204109913319aaENSMUSP00000101103.3
 
Protein coding
Q99PF4-2 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000073242.11Cdh23-201106883353aaENSMUSP00000072973.5
 
Protein coding
F8WIF5 GENCODE basicTSL:5
ENSMUST00000105462.8Cdh23-203105923321aaENSMUSP00000101102.2
 
Protein coding
E9Q7M6 GENCODE basicTSL:5
ENSMUST00000151194.8Cdh23-2123787No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000153525.8Cdh23-2143682No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000153677.2Cdh23-2153041No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000144462.8Cdh23-2111510No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000153149.8Cdh23-2131052No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000124712.2Cdh23-207650No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000123309.2Cdh23-206438No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000135638.8Cdh23-21010435No protein-
 
Retained intron
-TSL:5
ENSMUST00000128249.8Cdh23-20910295No protein-
 
Retained intron
-TSL:5
ENSMUST00000127312.8Cdh23-2082574No protein-
 
Retained intron
-TSL:5
ENSMUST00000156501.3Cdh23-2161064No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 71, Coding exons: 69, Transcript length: 11,096 bps, Translation length: 3,354 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99PF4

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000105461.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.