Mouse (GRCm39)
Description

Rap guanine nucleotide exchange factor (GEF) 6 [Source:MGI Symbol;Acc:MGI:2384761]

Gene Synonyms

C030018K18Rik, PDZ-GEF2, Pdzgef2, RA-GEF-2

Location
About this transcript

This transcript has 28 exons, is annotated with 52 domains and features, is associated with 6586 variant alleles and maps to 429 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000101206.10Rapgef6-20258641609aaENSMUSP00000098766.4
 
Protein coding
Q5NCJ1 Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000102743.10Rapgef6-20381891601aaENSMUSP00000099804.4
 
Protein coding
CCDS24699Q5NCJ0 GENCODE basicAPPRIS P4TSL:5
ENSMUST00000239168.2Rapgef6-21371311267aaENSMUSP00000159106.2
 
Protein coding
A0A5F8MPT3 GENCODE basic
ENSMUST00000207429.2Rapgef6-21051641606aaENSMUSP00000147135.2
 
Protein coding
CCDS83809B2RUJ6 GENCODE basicTSL:1
ENSMUST00000108894.2Rapgef6-20434751131aaENSMUSP00000104522.2
 
Protein coding
Q5NCJ5 GENCODE basicTSL:5
ENSMUST00000094536.10Rapgef6-20133721123aaENSMUSP00000092114.4
 
Protein coding
Q5NCJ4 GENCODE basicTSL:5
ENSMUST00000218995.2Rapgef6-2112674599aaENSMUSP00000151509.2
 
Protein coding
A0A1W2P734 TSL:1CDS 3' incomplete
ENSMUST00000108895.8Rapgef6-2051829544aaENSMUSP00000104523.2
 
Protein coding
Q5NCJ2 GENCODE basicTSL:1
ENSMUST00000136494.2Rapgef6-206716111aaENSMUSP00000114574.2
 
Protein coding
F7ACB1 TSL:3CDS 5' incomplete
ENSMUST00000139360.2Rapgef6-207692No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000155132.8Rapgef6-209628No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000149372.2Rapgef6-2084843No protein-
 
Retained intron
-TSL:1
ENSMUST00000220269.2Rapgef6-2122797No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 28, Coding exons: 28, Transcript length: 8,189 bps, Translation length: 1,601 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24699

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000102743.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.