Transcript: ENSMUST00000092888.11 Fbp1-201

Description

fructose bisphosphatase 1 [Source:MGI Symbol;Acc:MGI:95492]

Gene Synonyms

FBPase brain isoform, FBPase liver, Fbp-2, Fbp3

Location

Chromosome 13: 63,012,567-63,036,096 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 2165 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000069805.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000092888.11	Fbp1-201	1479	338aa	ENSMUSP00000090564.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26590	Q9QXD6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000150013.2	Fbp1-203	612	133aa	ENSMUSP00000117146.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6YS63	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000134814.2	Fbp1-202	704	57aa	ENSMUSP00000115703.2	Nonsense mediated decay		E9Q0T7	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,479 bps, Translation length: 338 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9QXD6

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26590

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000092888.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000092888.11 Fbp1-201

Summary

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Transcript: ENSMUST00000092888.11 Fbp1-201

Summary

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