Transcript: ENSMUST00000088735.4 Olfm4-201

Description

olfactomedin 4 [Source:MGI Symbol;Acc:MGI:2685142]

Gene Synonyms

GC1, GW112, LOC239192, LOC380924, OlfD, pPD4

Location

Chromosome 14: 80,237,742-80,259,370 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 1452 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022026.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000088735.4	Olfm4-201	1640	538aa	ENSMUSP00000086112.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36989	D3YYD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000228749.2	Olfm4-203	2801	505aa	ENSMUSP00000154285.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3UZZ4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000226541.2	Olfm4-202	609	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,640 bps, Translation length: 538 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36989

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000088735.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000088735.4 Olfm4-201

Summary

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Transcript: ENSMUST00000088735.4 Olfm4-201

Summary

About Us

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