Transcript: ENSMUST00000084628.5 Hs3st2-201

Description

heparan sulfate (glucosamine) 3-O-sulfotransferase 2 [Source:MGI Symbol;Acc:MGI:1333802]

Gene Synonyms

6430516N12Rik, A830061E14Rik

Location

Chromosome 7: 120,991,513-121,100,993 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 6112 variant alleles and maps to 162 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046321.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000084628.5	Hs3st2-201	2278	367aa	ENSMUSP00000081678.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40115	Q673U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000206880.2	Hs3st2-202	1149	176aa	ENSMUSP00000146027.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q673U1-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,278 bps, Translation length: 367 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q673U1

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40115

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000084628.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000084628.5 Hs3st2-201

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Transcript: ENSMUST00000084628.5 Hs3st2-201

Summary

About Us

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