Transcript: ENSMUST00000082431.6 Gpx2-201

Description

glutathione peroxidase 2 [Source:MGI Symbol;Acc:MGI:106609]

Gene Synonyms

GI-GPx, GPx-GI, intestinal GPx

Location

Chromosome 12: 76,839,111-76,842,273 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 703 variant alleles and maps to 137 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000042808.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000082431.6	Gpx2-201	1010	190aa	ENSMUSP00000081012.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25996	A0A0R4J111	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000221421.2	Gpx2-202	3165	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,010 bps, Translation length: 190 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25996

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000082431.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

selenocysteine [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000082431.6 Gpx2-201

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Transcript: ENSMUST00000082431.6 Gpx2-201

Summary

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