Transcript: ENSMUST00000081580.3 Gm5089-201

Description

predicted gene 5089 [Source:MGI Symbol;Acc:MGI:3644731]

Gene Synonyms

C030005G22Rik

Location

About this transcript

This transcript has 3 exons, is associated with 1343 variant alleles and maps to 96 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000238321.2	Gm5089-202	1668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
ENSMUST00000081580.3	Gm5089-201	2008	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,008 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000081580.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.