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Mouse (GRCm39)
Description

chromobox 1 [Source:MGI Symbol;Acc:MGI:105369]

Gene Synonyms

Cbx-rs2, E430007M08Rik, HP1B, Hp1beta, M31, MOD1

Location
About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 1496 variant alleles and maps to 223 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000093943.11Cbx1-2031303185aaENSMUSP00000091475.4
 
Protein coding
CCDS25303P83917 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000487690.1Cbx1-2072385185aaENSMUSP00000266053.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487702.1Cbx1-2192354185aaENSMUSP00000266065.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487689.1Cbx1-2062262185aaENSMUSP00000266052.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487704.1Cbx1-2212253193aaENSMUSP00000266067.1
 
Protein coding
-GENCODE Basic
ENSMUST00000487692.1Cbx1-2092237185aaENSMUSP00000266055.1
 
Protein coding
CCDS25303-GENCODE PrimaryGENCODE BasicAPPRIS P1
ENSMUST00000575925.1Cbx1-2432236150aaENSMUSP00000354288.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000487700.1Cbx1-2172227185aaENSMUSP00000266063.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000559143.1Cbx1-2402173185aaENSMUSP00000337506.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000079702.5Cbx1-2022111150aaENSMUSP00000078640.4
 
Protein coding
Q9CYJ8 GENCODE BasicTSL:1
ENSMUST00000575927.1Cbx1-2452108150aaENSMUSP00000354290.1
 
Protein coding
-GENCODE Basic
ENSMUST00000559141.1Cbx1-238205175aaENSMUSP00000337504.1
 
Protein coding
-GENCODE Basic
ENSMUST00000487691.1Cbx1-2081933185aaENSMUSP00000266054.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000018810.11Cbx1-2011844138aaENSMUSP00000018810.4
 
Protein coding
Q7TPM0 GENCODE PrimaryGENCODE BasicTSL:1
ENSMUST00000584317.1Cbx1-2481456185aaENSMUSP00000362682.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000575928.1Cbx1-2461433185aaENSMUSP00000354291.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000584326.1Cbx1-2571348185aaENSMUSP00000362691.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000559131.1Cbx1-2281337185aaENSMUSP00000337494.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487699.1Cbx1-2161316185aaENSMUSP00000266062.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000584327.1Cbx1-2581244193aaENSMUSP00000362692.1
 
Protein coding
-GENCODE Basic
ENSMUST00000487697.1Cbx1-2141229185aaENSMUSP00000266060.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000575926.1Cbx1-2441228193aaENSMUSP00000354289.1
 
Protein coding
-GENCODE Basic
ENSMUST00000559134.1Cbx1-2311225185aaENSMUSP00000337497.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487698.1Cbx1-2151215193aaENSMUSP00000266061.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000487694.1Cbx1-2111199185aaENSMUSP00000266057.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487701.1Cbx1-2181189185aaENSMUSP00000266064.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000487708.1Cbx1-2251167141aaENSMUSP00000266071.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584329.1Cbx1-2601165185aaENSMUSP00000362694.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000584334.1Cbx1-2651157185aaENSMUSP00000362699.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000559144.1Cbx1-2411141185aaENSMUSP00000337507.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000584332.1Cbx1-2631114141aaENSMUSP00000362697.1
 
Protein coding
-GENCODE Basic
ENSMUST00000559138.1Cbx1-2351105159aaENSMUSP00000337501.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584336.1Cbx1-2671079185aaENSMUSP00000362701.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000575929.1Cbx1-2471067147aaENSMUSP00000354292.1
 
Protein coding
-GENCODE Basic
ENSMUST00000487703.1Cbx1-2201066149aaENSMUSP00000266066.1
 
Protein coding
-GENCODE PrimaryGENCODE Basic
ENSMUST00000487693.1Cbx1-2101050141aaENSMUSP00000266056.1
 
Protein coding
-GENCODE Basic
ENSMUST00000559133.1Cbx1-2301040133aaENSMUSP00000337496.1
 
Protein coding
-GENCODE Basic
ENSMUST00000487696.1Cbx1-2131039141aaENSMUSP00000266059.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584320.1Cbx1-2511030185aaENSMUSP00000362685.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000584337.1Cbx1-2681030185aaENSMUSP00000362702.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000584325.1Cbx1-2561016141aaENSMUSP00000362690.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584322.1Cbx1-2531002185aaENSMUSP00000362687.1
 
Protein coding
CCDS25303-GENCODE BasicAPPRIS P1
ENSMUST00000559145.1Cbx1-2421001141aaENSMUSP00000337508.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584335.1Cbx1-266930141aaENSMUSP00000362700.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584319.1Cbx1-25087075aaENSMUSP00000362684.1
 
Protein coding
-GENCODE Basic
ENSMUST00000584333.1Cbx1-264869141aaENSMUSP00000362698.1
 
Protein coding
-GENCODE Basic
ENSMUST00000559139.1Cbx1-2362397146aaENSMUSP00000337502.1
 
Nonsense mediated decay
--
ENSMUST00000134585.8Cbx1-2042377138aaENSMUSP00000137834.2
 
Nonsense mediated decay
Q7TPM0 TSL:1
ENSMUST00000559136.1Cbx1-2332376138aaENSMUSP00000337499.1
 
Nonsense mediated decay
--
ENSMUST00000559137.1Cbx1-2342373133aaENSMUSP00000337500.1
 
Nonsense mediated decay
--
ENSMUST00000584328.1Cbx1-2591535138aaENSMUSP00000362693.1
 
Nonsense mediated decay
--
ENSMUST00000487706.1Cbx1-2231460138aaENSMUSP00000266069.1
 
Nonsense mediated decay
--
ENSMUST00000487705.1Cbx1-2221366138aaENSMUSP00000266068.1
 
Nonsense mediated decay
--
ENSMUST00000559135.1Cbx1-2321365185aaENSMUSP00000337498.1
 
Nonsense mediated decay
CCDS25303--
ENSMUST00000487707.1Cbx1-2241359146aaENSMUSP00000266070.1
 
Nonsense mediated decay
--
ENSMUST00000487695.1Cbx1-2121358138aaENSMUSP00000266058.1
 
Nonsense mediated decay
--
ENSMUST00000584318.1Cbx1-2491355185aaENSMUSP00000362683.1
 
Nonsense mediated decay
CCDS25303--
ENSMUST00000584331.1Cbx1-2621314138aaENSMUSP00000362696.1
 
Nonsense mediated decay
--
ENSMUST00000487709.1Cbx1-2261308138aaENSMUSP00000266072.1
 
Nonsense mediated decay
--
ENSMUST00000584330.1Cbx1-2611290138aaENSMUSP00000362695.1
 
Nonsense mediated decay
--
ENSMUST00000559132.1Cbx1-2291224133aaENSMUSP00000337495.1
 
Nonsense mediated decay
--
ENSMUST00000584321.1Cbx1-2521163133aaENSMUSP00000362686.1
 
Nonsense mediated decay
--
ENSMUST00000584324.1Cbx1-255116175aaENSMUSP00000362689.1
 
Nonsense mediated decay
--
ENSMUST00000559142.1Cbx1-2391132175aaENSMUSP00000337505.1
 
Nonsense mediated decay
--
ENSMUST00000559140.1Cbx1-237112435aaENSMUSP00000337503.1
 
Nonsense mediated decay
--
ENSMUST00000584323.1Cbx1-25498775aaENSMUSP00000362688.1
 
Nonsense mediated decay
--
ENSMUST00000487710.1Cbx1-227900138aaENSMUSP00000266073.1
 
Nonsense mediated decay
--
ENSMUST00000141257.2Cbx1-205814No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,111 bps, Translation length: 150 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000079702.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.