Mouse (GRCm39)
Description

APC, WNT signaling pathway regulator [Source:MGI Symbol;Acc:MGI:88039]

Gene Synonyms

CC1, Min, adenomatosis polyposis coli

Location
About this transcript

This transcript has 16 exons, is annotated with 119 domains and features, is associated with 5294 variant alleles and maps to 438 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000079362.13Apc-202128112842aaENSMUSP00000078337.6
 
Protein coding
CCDS29125B2RUG9 Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENSMUST00000115781.10Apc-203123462808aaENSMUSP00000111447.4
 
Protein coding
E9QLQ9 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000171187.8Apc-20935881133aaENSMUSP00000127131.2
 
Protein coding
E9Q4H1 TSL:5CDS 3' incomplete
ENSMUST00000066133.7Apc-2011185324aaENSMUSP00000064214.7
 
Protein coding
Q8C493 GENCODE basicTSL:1
ENSMUST00000165590.2Apc-205263351aaENSMUSP00000128327.2
 
Nonsense mediated decay
F6Q4R2 TSL:5CDS 5' incomplete
ENSMUST00000163295.2Apc-20460821aaENSMUSP00000129095.2
 
Nonsense mediated decay
F6Z405 TSL:5CDS 5' incomplete
ENSMUST00000167136.2Apc-206435No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000170195.2Apc-2082732No protein-
 
Retained intron
-TSL:1
ENSMUST00000170023.8Apc-2071825No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 16, Coding exons: 15, Transcript length: 12,811 bps, Translation length: 2,842 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29125

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000079362.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.