Transcript: ENSMUST00000078961.6 Kifc5b-201

Description

kinesin family member C5B [Source:MGI Symbol;Acc:MGI:2137414]

Gene Synonyms

kinesin family c-terminal 5B

Location

Chromosome 17: 27,136,065-27,151,557 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 26 domains and features, is associated with 1574 variant alleles and maps to 262 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024301.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000078961.6	Kifc5b-201	2631	672aa	ENSMUSP00000077984.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37517	E9PUA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000235998.2	Kifc5b-203	2125	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000235206.2	Kifc5b-202	1845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000236476.2	Kifc5b-204	819	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,631 bps, Translation length: 672 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37517

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000078961.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000078961.6 Kifc5b-201

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Transcript: ENSMUST00000078961.6 Kifc5b-201

Summary

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