Transcript: ENSMUST00000078431.13

Description

novel transcript

Location

Chromosome 6: 122,113,587-122,128,141 forward strand.

About this transcript

This transcript has 6 exons, is associated with 1130 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121497.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000245153.1	-	2482	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000245292.1	-	2367	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000244871.1	-	2259	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000245224.1	-	1857	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000245902.1	-	1851	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000244828.1	-	1593	No protein	-	lncRNA	-
ENSMUST00000078431.13	-	1574	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241223.1	-	1291	No protein	-	lncRNA	-
ENSMUST00000245558.1	-	1218	No protein	-	lncRNA	-
ENSMUST00000246046.1	-	1184	No protein	-	lncRNA	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 1,574 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000078431.13

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENSMUST00000078431.13

Summary

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Transcript: ENSMUST00000078431.13

Summary

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