Transcript: ENSMUST00000072801.5 Vmn1r82-201

Description

vomeronasal 1 receptor 82 [Source:MGI Symbol;Acc:MGI:2159656]

Gene Synonyms

V1rg12

Location

Chromosome 7: 12,034,357-12,042,509 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 890 variant alleles and maps to 59 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000058132.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000191002.2	Vmn1r82-202	918	305aa	ENSMUSP00000140782.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A087WRV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000072801.5	Vmn1r82-201	4784	304aa	ENSMUSP00000072580.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57493	Q8R283	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000227672.2	Vmn1r82-203	3651	187aa	ENSMUSP00000154524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BRC3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 4,784 bps, Translation length: 304 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57493

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000072801.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000072801.5 Vmn1r82-201

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Transcript: ENSMUST00000072801.5 Vmn1r82-201

Summary

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