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Mouse (GRCm39)
Description

PDZ and LIM domain 1 (elfin) [Source:MGI Symbol;Acc:MGI:1860611]

Gene Synonyms

CLP36, mClim1

Location
About this transcript

This transcript has 7 exons, is annotated with 19 domains and features, is associated with 4236 variant alleles and maps to 278 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000068439.13Pdlim1-2012571327aaENSMUSP00000064545.6
 
Protein coding
CCDS37977O70400 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000182432.2Pdlim1-202692198aaENSMUSP00000138383.2
 
Protein coding
S4R1V0 TSL:3CDS 3' incomplete
ENSMUST00000182636.2Pdlim1-2042835No protein-
 
Retained intron
-TSL:1
ENSMUST00000182540.2Pdlim1-203715No protein-
 
Retained intron
-TSL:2
ENSMUST00000182813.2Pdlim1-205666No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,571 bps, Translation length: 327 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70400

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37977

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000068439.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.