Transcript: ENSMUST00000067947.8 Rock1-201

Description

Rho-associated coiled-coil containing protein kinase 1 [Source:MGI Symbol;Acc:MGI:107927]

Gene Synonyms

1110055K06Rik, Rock-I

Location

Chromosome 18: 10,063,737-10,182,045 reverse strand.

About this transcript

This transcript has 33 exons, is annotated with 49 domains and features, is associated with 4855 variant alleles and maps to 504 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000024290.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000067947.8	Rock1-201	7104	1354aa	ENSMUSP00000069549.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29053	P70335-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000234734.2	Rock1-205	1989	504aa	ENSMUSP00000157140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4L2X0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000435911.1	Rock1-209	6646	1068aa	ENSMUSP00000214274.1	Nonsense mediated decay		-	-
ENSMUST00000435912.1	Rock1-210	6641	1159aa	ENSMUSP00000214275.1	Nonsense mediated decay		-	-
ENSMUST00000566570.1	Rock1-214	6604	1303aa	ENSMUSP00000344933.1	Nonsense mediated decay		-	-
ENSMUST00000435913.1	Rock1-211	6470	1287aa	ENSMUSP00000214276.1	Nonsense mediated decay		-	-
ENSMUST00000435914.1	Rock1-212	6469	435aa	ENSMUSP00000214277.1	Nonsense mediated decay		-	-
ENSMUST00000234610.2	Rock1-204	4320	1089aa	ENSMUSP00000157135.2	Nonsense mediated decay		A0A3Q4EGR2	-
ENSMUST00000435915.1	Rock1-213	3967	339aa	ENSMUSP00000214278.1	Nonsense mediated decay		-	-
ENSMUST00000234926.2	Rock1-206	3840	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234463.2	Rock1-203	3494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235075.2	Rock1-208	2735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234050.2	Rock1-202	1877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235067.2	Rock1-207	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 7,104 bps, Translation length: 1,354 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P70335

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29053

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000067947.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

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Transcript: ENSMUST00000067947.8 Rock1-201

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Transcript: ENSMUST00000067947.8 Rock1-201

Summary

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