Transcript: ENSMUST00000065086.6 Gas1-201

Description

growth arrest specific 1 [Source:MGI Symbol;Acc:MGI:95655]

Gene Synonyms

Gas-1

Location

Chromosome 13: 60,322,219-60,325,179 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 22 domains and features, is associated with 774 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000052957.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000223933.2	Gas1-202	1155	384aa	ENSMUSP00000153311.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26579	A0A286YD87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSMUST00000065086.6	Gas1-201	2961	343aa	ENSMUSP00000064555.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q01721	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 2,961 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01721

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000065086.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000065086.6 Gas1-201

Summary

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Transcript: ENSMUST00000065086.6 Gas1-201

Summary

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