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Mouse (GRCm39)
Description

autophagy related 4D, cysteine peptidase [Source:MGI Symbol;Acc:MGI:2444308]

Gene Synonyms

9830134P12Rik, APG4-D, Apg4d, Autl4

Location
About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 1199 variant alleles and maps to 296 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000065005.5Atg4d-2015951474aaENSMUSP00000068450.4
 
Protein coding
CCDS22899Q8BGV9 Ensembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1TSL:1
ENSMUST00000217269.2Atg4d-204445100aaENSMUSP00000150253.2
 
Nonsense mediated decay
A0A1L1STB3 TSL:2CDS 5' incomplete
ENSMUST00000216826.2Atg4d-2032123No protein-
 
Retained intron
-TSL:2
ENSMUST00000215767.2Atg4d-2021204No protein-
 
Retained intron
-TSL:NA
ENSMUST00000217591.2Atg4d-205697No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,951 bps, Translation length: 474 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BGV9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS22899

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000065005.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.