Transcript: ENSMUST00000063103.5 1700048O20Rik-201

Description

RIKEN cDNA 1700048O20 gene [Source:MGI Symbol;Acc:MGI:1920637]

Location

Chromosome 9: 121,767,201-121,776,080 forward strand.

About this transcript

This transcript has 4 exons, is associated with 961 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000043773.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000214777.2	1700048O20Rik-202	1900	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000063103.5	1700048O20Rik-201	1642	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000215356.2	1700048O20Rik-203	456	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,642 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000063103.5

Type

LncRNA

Annotation Method

Long intergenic non-coding RNAs (lincRNAs) were annotated by the Ensembl lincRNA annotation pipeline.

Transcript: ENSMUST00000063103.5 1700048O20Rik-201

Summary

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Transcript: ENSMUST00000063103.5 1700048O20Rik-201

Summary

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