Transcript: ENSMUST00000060650.7 Frmd7-201

Description

FERM domain containing 7 [Source:MGI Symbol;Acc:MGI:2686379]

Gene Synonyms

EG665849, LOC385354

Location

Chromosome X: 49,984,057-50,031,587 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 27 domains and features, is associated with 3327 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000036131.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000060650.7	Frmd7-201	2112	703aa	ENSMUSP00000057103.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53067	A2AD83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000164311.7	Frmd7-202	2063	85aa	ENSMUSP00000126628.2	Nonsense mediated decay		E9PXK8	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,112 bps, Translation length: 703 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2AD83

CCDS

This transcript is a member of the Mouse CCDS set: CCDS53067

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000060650.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000060650.7 Frmd7-201

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Transcript: ENSMUST00000060650.7 Frmd7-201

Summary

About Us

Get help

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