Transcript: ENSMUST00000059675.4 Or5b21-201

Description

olfactory receptor family 5 subfamily B member 21 [Source:MGI Symbol;Acc:MGI:3031278]

Gene Synonyms

GA_x6K02T2RE5P-3191201-3192160, MOR202-4, Olfr1444

Location

Chromosome 19: 12,839,106-12,840,234 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 26 domains and features, is associated with 536 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046272.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000213606.2	Or5b21-202	1872	319aa	ENSMUSP00000150212.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29640	Q0VEZ4 Q8VFX2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000059675.4	Or5b21-201	1129	319aa	ENSMUSP00000062460.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29640	Q0VEZ4 Q8VFX2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,129 bps, Translation length: 319 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8VFX2

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29640

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000059675.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000059675.4 Or5b21-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000059675.4 Or5b21-201

Summary

About Us

Get help

Our sister sites

Follow us